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View All on GitHubA unifying framework for biomedical research knowledge graphs
AI Summary: This feature request proposes the development of a tool that generates a Neo4j GraphQL Library-compatible GraphQL schema directly from a BioCypher schema file. This would automate the creation of a GraphQL API for BioCypher knowledge graphs, ensuring consistency between the BioCypher data model and the exposed API, and overcoming limitations of Neo4j's introspection tool.
A unifying framework for biomedical research knowledge graphs
AI Summary: The BioCypher Python package has a bug where a `NameError` occurs due to an optional dependency (scirpy) not being properly handled in type annotations. The task is to fix this bug by either removing the type annotation referencing the optional dependency's class (`AirrCell`) or making `scirpy` a mandatory dependency, ensuring the code functions correctly regardless of whether `scirpy` is installed.
A unifying framework for biomedical research knowledge graphs