AI Summary: The static library for r-polars version 1.7.0 RC is not working on musl environments like Alpine Linux due to a misconfiguration in the build process. Specifically, the GCC compiler, when used with `_FORTIFY_SOURCE=2`, is emitting the `__fprintf_chk` symbol, which is not available in musl, causing build failures. A temporary workaround using `LD_PRELOAD` exists, but a proper fix is needed upstream.
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AI Summary: This issue proposes standardizing default argument values across the package to ensure consistency. The goal is to identify and harmonize equivalent input arguments that currently have differing default values, improving the overall user experience and predictability of the package's functions.
palaeoverse: an R package developed by palaeobiologists, for palaeobiologists
AI Summary: This issue requests the implementation of the `ewm_sum` function in r-polars, which is a feature recently introduced in Polars version 1.43. The user notes that the Python version is also marked as unstable and inquires about its potential inclusion in the upcoming 1.44 release.
NHS and healthcare related datasets for training and learning R
R package assistant for conducting a CODECHECK
Sample Metadata Curation for curatedMetagenomicData
Financial and Actuarial Mathematics for Life Contingencies
AI Summary: This issue proposes migrating the project's error messages and progress bar implementations to the `cli` R package. The `cli` package offers enhanced visual presentation and is built on base R, avoiding new external dependencies. The change is expected to be straightforward, involving simple find-and-replace operations.
palaeoverse: an R package developed by palaeobiologists, for palaeobiologists
AI Summary: This issue proposes a discussion on adopting the Darwin Core data standard for biodiversity data within the organization's packages. The standard is widely used, even for historical and fossil data, and its adoption could promote data sharing and potentially lead to an R package for fossil specimen data processing.
palaeoverse: an R package developed by palaeobiologists, for palaeobiologists
AI Summary: This issue requests a simple text correction in the README file. The term 'flextable' needs to be replaced with 'gt' to accurately reflect the library's current naming convention. This is a straightforward find-and-replace task.
R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.
R Package - Download and Prepare C14 Dates from Different Source Databases
AI Summary: This issue proposes moving the `kableExtra` package from the `imports` section to the `suggests` section in the `stockplotr` package's DESCRIPTION file. This change is motivated because `kableExtra` is not a core dependency but is used for testing and demonstrating functionality.
R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.
AI Summary: This issue requests the removal of trailing whitespace from a specific line in the README.md file. It's presented as a hackathon issue and a good first contribution, aiming to clean up minor formatting inconsistencies in the documentation.
Shiny App to perform NCA on (pre-)clinical data
AI Summary: This issue addresses a bug where PK summary exclusion flags are named inconsistently with CDISC standards. The flags `PKSUM1F`, `PKSUM1FN`, and `PKSUM1RS` need to be renamed to `PKSUMXF`, `PKSUMXFN`, and `PKSUMXRS` respectively, across various files in the codebase. This change ensures compliance with CDISC naming conventions while preserving the original exclusion semantics.
Shiny App to perform NCA on (pre-)clinical data
AI Summary: This issue aims to standardize the roxygen documentation tag from `@return` to `@returns` across R files in the repository. The change is necessary to align with project conventions and improve documentation consistency. The task involves a find-and-replace operation in a specified list of files, followed by regenerating documentation and ensuring code checks pass.
Shiny App to perform NCA on (pre-)clinical data
AI Summary: This issue proposes improving a generic error message in the `data_mapping.R` script. The current error message for an incorrect number of `mapping_section` values is unhelpful; the suggested fix is to include the actual count and the offending values in the error message for better debugging.
Shiny App to perform NCA on (pre-)clinical data
AI Summary: This issue requests the addition of AI agent instructions from the NOAA-FIMS project into a new '.github/instructions' folder. The instructions will be reviewed and edited after the pull request is submitted.
Partially automate a U.S. stock assessment report.
AI Summary: This issue requests the addition of AI agent instructions from the NOAA-FIMS project into a new '.github/instructions' folder. The instructions will be reviewed and edited after the pull request is submitted.
R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.
AI Summary: This issue involves minor documentation corrections. It requires changing a specific R code reference to an HTML link to avoid documentation build warnings and adding missing markup to another function's documentation. These are straightforward text and formatting adjustments.
R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.
AI Summary: This issue requests adding two specific files, `.octocov.yml` and `.devcontainer`, to the `.Rbuildignore` file in the main project directory. The task involves editing this file to include the paths of these items, similar to how one would add entries to a `.gitignore` file.
R package that contains general tables and figures such as standard objects in an assessment report, and other important visualizations to interpret results of stock assessment models.
Accelerated array computing and code transformations for R
R package providing a tidy grammar of population genetics, facilitating the manipulation and analysis of large datasets of biallelic single nucleotide polymorphisms (SNPs).
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