Open Issues Need Help
View All on GitHubV-pipe is a pipeline designed for analysing NGS data of short viral genomes
AI Summary: The task is to determine if the V-pipe NGS data analysis pipeline is still actively maintained and to troubleshoot the reported errors encountered when using it with different Snakemake versions (7, 8, and 9). The errors involve incompatibility with newer Snakemake versions and issues with remote URLs for resource files.
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
AI Summary: The task is to document the configuration options for the PredictHaplo haplotype reconstruction tool within the V-pipe NGS data analysis workflow. This involves identifying the relevant parameters within the V-pipe configuration files and creating clear documentation explaining their purpose and usage.
V-pipe is a pipeline designed for analysing NGS data of short viral genomes