hodcroftlab/covariants

Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

320 stars 0 forks 0 watchers Python

covid-19 covid19 mutation mutation-distribution nextstrain sars-cov-2 sarscov2 tracking variants

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2 Open Issues Need Help Last updated: Jun 27, 2025

Open Issues Need Help

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Recombinants in Pango toggle don't have a label (per country page) 2 months ago

AI Summary: Add a label to the 'recombinants' option in the Pango toggle on the per-country page of the CoVariants website. The label should remain consistent as "recombinants" regardless of whether Nextclade or Pango is toggled.

Complexity: 2/5

bug help wanted good first issue scope: web

hodcroftlab/covariants

320

Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

Python

#covid-19#covid19#mutation#mutation-distribution#nextstrain#sars-cov-2#sarscov2#tracking#variants

Change order of the listed variants on the defining mutations file 2 months ago

AI Summary: Reorder the SARS-CoV-2 variants listed in the defining mutations file, prioritizing newer variants over older ones. This involves modifying the `clusters.py` file or the main CoV menu and potentially the associated data structures to reflect the new order. The goal is to improve the user experience by highlighting the most recent variants more prominently.

Complexity: 3/5

enhancement help wanted good first issue scope: web

hodcroftlab/covariants

320

Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.

Python

#covid-19#covid19#mutation#mutation-distribution#nextstrain#sars-cov-2#sarscov2#tracking#variants