Open Issues Need Help
View All on GitHub Memory for CellrangerTE about 1 hour ago
AI Summary: The user is experiencing a memory allocation failure when running `cellranger count` with CellrangerTE v7.2.0, specifically at the `WRITE_GENE_INDEX` step. This occurs despite using a machine with 180GB of RAM, and they previously noted high memory usage during reference building. They are seeking to know if others have encountered this behavior.
Complexity:
3/5
good first issue
Script to create a Cell Ranger reference database that can quantify transposable elements.
Shell