Open Issues Need Help
View All on GitHub keep contigs in the "forward seed" direction about 2 months ago
enhancement good first issue
Pipeline for assembling outward from seed sequences in large metagenomic datasets
Python
Add pileup visualization 3 months ago
AI Summary: Develop a visualization tool to generate pileup visualizations of contigs assembled by the outward assembly pipeline. The tool should handle pileups of up to a few thousand reads efficiently, and gracefully handle larger datasets by switching to a coverage plot instead. Integration with the existing outward assembly pipeline is required.
Complexity:
4/5
enhancement good first issue
Pipeline for assembling outward from seed sequences in large metagenomic datasets
Python