Biomni: a general-purpose biomedical AI agent

agent ai biomedicine
3 Open Issues Need Help Last updated: Jul 11, 2025

Open Issues Need Help

View All on GitHub

AI Summary: Integrate flow cytometry data from FlowRepository into the Biomni project. This involves using either the FlowRepository API or the R package FlowRepositoryR to download raw data and incorporate it into Biomni's existing data infrastructure. The contributor will work with the Biomni team.

Complexity: 4/5
good first issue help wanted new-dataset

Biomni: a general-purpose biomedical AI agent

Python
#agent#ai#biomedicine
Adding primekg about 2 months ago

AI Summary: Integrate PrimeKG, a biomedical knowledge graph, into the Biomni AI agent. This involves adding functionalities to access, query, and utilize PrimeKG's data within Biomni's existing framework, potentially requiring modifications to the agent's codebase and data pipelines.

Complexity: 4/5
help wanted new-dataset

Biomni: a general-purpose biomedical AI agent

Python
#agent#ai#biomedicine
Add EveBio dataset about 2 months ago

AI Summary: Integrate the EveBio dataset into the Biomni system. This involves understanding the dataset's structure, format, and content; determining the best way to incorporate it into Biomni's existing data infrastructure; and potentially developing new functionalities or modifying existing ones to effectively utilize the new data.

Complexity: 4/5
good first issue help wanted new-dataset

Biomni: a general-purpose biomedical AI agent

Python
#agent#ai#biomedicine