Calcium imaging inter-session alignment

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2 Open Issues Need Help Last updated: Sep 4, 2025

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enhancement help wanted

Calcium imaging inter-session alignment

MATLAB

AI Summary: The user needs help resolving an issue with the CaliAli software where the aligned video output, after session alignment, has a smaller field of view than the original video. This results in the loss of neurons when running the subsequent CNMFE (calcium imaging analysis) step. The task is to find a solution within CaliAli to process the CNMFE step using the full field of view of the aligned video, without the trimming caused by the column translation.

Complexity: 4/5
help wanted

Calcium imaging inter-session alignment

MATLAB