Open Issues Need Help
View All on GitHub Data Science • Microbial Ecology
AI Summary: The user is experiencing an issue with the `microeco` R package where subsetting the `tax_table` within a `microtable` object using `subset()` does not correctly update the object for downstream differential abundance analysis using `trans_diff$new()`. The task is to debug this issue, identify why the subsetting is not working as expected, and provide a solution to correctly subset the data so that the `trans_diff$new()` function operates on the Archaea subset only.
Complexity:
4/5
good first issue