PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

bioinformatics biophysics chemistry hacktoberfest help-wanted
13 Open Issues Need Help Last updated: Jul 30, 2026

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PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted
help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted
bug help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted
good first issue help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted
bug help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted
bug help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted
bug help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted

AI Summary: This feature request proposes replacing the current PQR file format used by `pdb2pqr` and `apbs` with a modified mmCIF format. The new format would embed PQR-specific data (partial charge and radius) as custom columns within a standard mmCIF structure, aiming to eliminate whitespace/alignment issues and leverage existing mmCIF parsing tools.

Complexity: 4/5
help wanted

PDB2PQR - determining titration states, adding missing atoms, and assigning charges/radii to biomolecules.

Python
#bioinformatics#biophysics#chemistry#hacktoberfest#help-wanted