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View All on GitHub optimal way to run pod5 about 1 year ago
AI Summary: The user is seeking guidance on the most efficient way to use the `pod5` writer, specifically regarding the compression step. They are unsure if they should manually multiprocess read compression before sending batches to be written, contrasting it with `pyslow5`'s integrated thread pool for compression and writing. They have an open question with ONT but haven't received a response.
Complexity:
4/5
help wanted
Psy-Fer/pyslow5-pod5-writer-benchmark Psy-Fer/pyslow5-pod5-writer-benchmark Testing pod5 and slow5 writing methods
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Testing pod5 and slow5 writing methods
Python