eco-connectivity-workflow good first issues (Jupyter Notebook)

Natural history illustration collaborators wanted about 5 hours ago

help wanted onboarding

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Add a held-out split alongside the in-sample Random Forest fit about 10 hours ago

good first issue area:ml

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Add a local smoke test to onboarding 3 days ago

good first issue area:docs onboarding

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Resistance-raster layers wanted (tracking issue) 20 days ago

help wanted area:data research

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Model a flagship species not yet covered (beaver / Sorraia horse / Tauros) 20 days ago

help wanted area:ml research

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Rivers vs canyons vs roads: single-factor surfaces, ablation, pinch points 20 days ago

help wanted area:ml research

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Automated pinch-point map atlas 20 days ago

help wanted area:qgis

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

First acquire_* script (OSM roads) as a repeatable template 20 days ago

good first issue area:data onboarding

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Field-observed barrier points from Survey123 into the hydrology layer 20 days ago

help wanted area:data

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Spatially-blocked cross-validation as the headline validation 20 days ago

help wanted area:ml validation

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Correct recording-density bias in the Air group suitability 20 days ago

help wanted area:ml validation

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Strengthen the thin Land group (~42 occurrence points) 20 days ago

help wanted area:data area:ml research

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Synthetic-grid unit test for the circuit solver 20 days ago

good first issue area:ml

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Scenario-log entry template in reproducibility-logs 20 days ago

good first issue area:logs

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Reusable PyQGIS current-flow map layout 20 days ago

good first issue area:qgis

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

Collaborators-wanted section in the README + a CONTRIBUTING quickstart 20 days ago

good first issue area:docs onboarding

coa-connectivity-lab/eco-connectivity-workflow

1

A reproducible ecological connectivity workflow using GBIF occurrence records, Natura 2000 protected area data, resistance surface modelling, and Omniscape connectivity analysis for conservation planning.

Jupyter Notebook

#biodiversity#conservation#conservation-planning#ecology-connectivity#gbif#geospatial#gis#guix#jupyter-notebook#landscape-ecology#natura2000#omniscape#open-science#python#python3#qgis#reproducible-research#spatial-analysis#species-distribution

coa-connectivity-lab/eco-connectivity-workflow

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