danforthcenter/plantcv

AI Summary: The user is experiencing a `ModuleNotFoundError` for `altair.vegalite.v5` when attempting to import `plantcv` within a Python 3.13 virtual environment on a Raspberry Pi. This indicates a dependency conflict where `plantcv` expects a specific `altair` module that is either missing or incompatible with the installed `altair` version or the bleeding-edge Python 3.13 release.

AI Summary: The user is following a PlantCV multi-leaf tutorial, but the `pcv.outputs.save_results()` function generates a CSV with hundreds of columns and only one row, which is not the expected readable output. The user suspects an installation issue because `pcv.__version__` returns '0.0.0' in their conda/Jupyter Lab environment on macOS, despite other parts of the code running fine.

AI Summary: The user is encountering an `ImportError` when attempting to import the `plantcv` library, specifically a "DLL load failed" message related to `_c_internal_utils`. This issue appeared suddenly, despite the library working correctly just hours prior, suggesting a recent change in the user's environment or dependencies.

AI Summary: The task is to debug a PlantCV installation issue on Windows 11. A user is unable to import the PlantCV library within a Python virtual environment, preventing their image analysis workflow from running. The solution likely involves verifying the PlantCV installation path, ensuring the virtual environment is correctly activated, and potentially resolving path conflicts or inconsistencies between the virtual environment and the PlantCV installation.

AI Summary: Debug and fix a bug in the PlantCV `fill_segments` function that throws a 'tuple' object has no attribute 'copy' error. The issue seems to stem from attempting to copy a tuple, and a potential fix involves replacing tuple assignment with object assignment.