z-fasta good first issues (Zig)

`stats`: Add gene and isoform-aware transcriptome stats 12 days ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add an explicit genome assembly stats view 12 days ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add per-protein physicochemical stats 2 months ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add expected-genome-size statistics 2 months ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add protein sequence-integrity stats 2 months ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Support multiple FASTA inputs in `stats` 2 months ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Select records with `stats --names` 2 months ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`get`: Bound GET lookup memory for high-record-count FASTA 2 months ago

enhancement help wanted optimization

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`index`: Reduce transcriptome indexing memory 2 months ago

enhancement help wanted optimization

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

eneskemalergin/z-fasta

Open Issues Need Help