eneskemalergin/z-fasta

`stats`: Add per-protein physicochemical stats about 2 hours ago

enhancement help wanted feature

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add expected-genome-size statistics about 2 hours ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add gene and isoform-aware transcriptome stats about 2 hours ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add protein sequence-integrity stats about 2 hours ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Add an explicit genome assembly stats view about 2 hours ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Support multiple FASTA inputs in `stats` about 2 hours ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`stats`: Select records with `stats --names` about 2 hours ago

enhancement help wanted feature

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`get`: Bound GET lookup memory for high-record-count FASTA about 2 hours ago

enhancement help wanted optimization

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

`index`: Reduce transcriptome indexing memory about 2 hours ago

enhancement help wanted optimization

eneskemalergin/z-fasta

5

A zero-dependency FASTA toolkit written in Zig. Speeds up standard samtools workflows by ~10-20x using SIMD.

Zig

#bioinformatics#fasta#proteomics#ziglang

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