microbiomedata

microbiomedata/nmdc-schema

National Microbiome Data Collaborative (NMDC) unified data model

7 good first / help-wanted issues · Python · last activity Jul 10, 2026

48 stars 12 forks 48 watchers Python Creative Commons Zero v1.0 Universal
ecoinformatics fair-data genomics linkml metabolomics metadata microbiome microbiomedata mixs nmdc proteomics samples schema standards transcriptomics
7 Open Issues Need Help Last updated: Jul 10, 2026

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good first issue infrastructure not content
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics
documentation good first issue
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics
microbiomedata/nmdc-schema
48

National Microbiome Data Collaborative (NMDC) unified data model

Python
#ecoinformatics#fair-data#genomics#linkml#metabolomics#metadata#microbiome#microbiomedata#mixs#nmdc#proteomics#samples#schema#standards#transcriptomics