The Chemical Data Processing Toolkit

chemoinformatics
2 Open Issues Need Help Last updated: Jul 23, 2025

Open Issues Need Help

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AI Summary: The task involves extending the existing CDPKit Python API to allow for conformer generation with ring puckering sampling, similar to RDKit's ConstrainedEmbed functionality. This requires investigating the current conformer generation capabilities within CDPKit, potentially modifying or extending existing functions, and adding new features to handle ring puckering constraints during the sampling process.

Complexity: 4/5
help wanted

The Chemical Data Processing Toolkit

C++
#chemoinformatics

AI Summary: The task is to determine if the CDPKit Python API provides a function to directly parse an SDF molblock string into a `Chem.Molecule` object, similar to how `Chem.parseSMILES()` handles SMILES strings. The solution likely involves finding the appropriate function within the CDPKit library or determining if a workaround (e.g., writing the string to a temporary file and then parsing) is necessary.

Complexity: 3/5
help wanted

The Chemical Data Processing Toolkit

C++
#chemoinformatics