sanger-tol

sanger-tol/insdcdownload

Nextflow DSL2 pipeline to download assemblies from INSDC.

1 stars 3 forks 1 watchers Nextflow MIT License

download genomics indexing nextflow pipeline

View on GitHub Website

2 Open Issues Need Help Last updated: Feb 12, 2026

Open Issues Need Help

View All on GitHub

Use the nf-core module for downloading from the NCBI 5 days ago

good first issue help wanted maintain

sanger-tol/insdcdownload

1

Nextflow DSL2 pipeline to download assemblies from INSDC.

Nextflow

#download#genomics#indexing#nextflow#pipeline

Implement nf-test 11 months ago

good first issue help wanted maintain testing

sanger-tol/insdcdownload

1

Nextflow DSL2 pipeline to download assemblies from INSDC.

Nextflow

#download#genomics#indexing#nextflow#pipeline