A bioinformatics pipeline for processing low or variable coverage whole genome sequencing data

1 Open Issue Need Help Last updated: Jul 18, 2025

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Bioinformatics Genome Sequencing Analysis

AI Summary: Debug a permission denied error for an R script (`plot_variant_qc.R`) within a bioinformatics pipeline. The error occurs when the pipeline is cloned or updated, and a workaround involves using `chmod +777`. The task requires identifying the root cause of the permission issue and implementing a permanent fix that doesn't involve manually changing file permissions.

Complexity: 3/5
bug help wanted

A bioinformatics pipeline for processing low or variable coverage whole genome sequencing data

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