PecanProject/pecan

good first issue

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Fix hack in trait.lookup function 21 days ago

Priority: 02 - Normal good first issue Status: Not started Status: Stale

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Restructure deeply nested documentation sections to improve navigation 23 days ago

good first issue Documentation

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Clean up and consolidate issue/PR labels (and update labeler workflow) 24 days ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Helper functions to format trait data from external databases (e.g. TRY) for PEcAn.MA 29 days ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Broken PDF link in rendered quarto demo notebooks about 1 month ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Refactor Settings handling in soilgrids_ic_process() about 1 month ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Improve documentation navigation by consolidating blank parent pages with their subsections about 1 month ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Make `BADM_IC_process()` use PEcAn Settings / MultiSettings consistently about 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

run_pecan.qmd uses `write.config.SIPNET` function without documenting installation of PEcAn.SIPNET about 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Replace legacy web UI tutorials in sections 5.1 and 5.2 with notebook demos in documentation about 2 months ago

AI Summary: This GitHub issue aims to update the project documentation by replacing two outdated web UI tutorials (sections 5.1 and 5.2) that currently feature a deprecated PHP interface. The goal is to substitute them with existing Quarto notebook tutorials, aligning the documentation with a new "notebook-first" approach. The tasks involve updating specific Rmd files to link to the pre-rendered notebook demos.

Complexity: 1/5

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Refactor README.md to align with notebook workflow and fix outdated content about 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Remove assumption that $modeloutdir == $outdir / "out" about 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Replace manual unit conversions to consistently use `ud_convert()` helper function 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Improve PEcAn.SIPNET package/model documentation and connect PEcAn.SIPNET README to PEcAn book 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

Deprecate gSSURGO.Query 2 months ago

good first issue

PecanProject/pecan

228

The Predictive Ecosystem Analyzer (PEcAn) is an integrated ecological bioinformatics toolbox.

R

#bayesian#cyberinfrastructure#data-assimilation#data-science#ecosystem-model#ecosystem-science#forecasting#meta-analysis#national-science-foundation#pecan#plants#r

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