cBioPortal/cbioportal

Add visual cue for uncalled mutations in patient view heatmap 3 days ago

enhancement good first issue

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Replace juice with lighter CSS inlining library for SVG export 11 days ago

good first issue triage

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Study View genes input allows OQL, but not OQL trackgroups about 2 months ago

bug good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

on study view store opt in to store chart settings 3 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

re-enable caching of docker images during build 3 months ago

good first issue devops

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Oncoprinter enable submitting of data in same format as MutationMapper 3 months ago

good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Auto order some groups on comparison page 3 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

show only specific samples in genomic evolution chart 3 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

[Bug] Samples with '+' in ID (e.g., PanCK+) are excluded from Plots tab 3 months ago

bug good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Remove track doesn't work on first try when coming from homepage 3 months ago

bug good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Remember user selection of the alteration tables in patient view 3 months ago

feature good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

When only RNA profile present in study, show it by default 4 months ago

good first issue triage

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Unauthorized studies can be selected with the SELECT ALL button 4 months ago

frontend good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

The "save tracks" button state should reflect gap state 4 months ago

bug good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Add filter columns for Structural Variants 4 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

[BUG] heatmap RNASeq scores not always aligned with oncoprint tracks 4 months ago

bug good first issue triage

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Make custom data work without study_id if one study 4 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Add validation for duplicate SAMPLE_IDs in timeline 4 months ago

good first issue python

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Homepage search improvement 4 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Explore updating Icon Library 4 months ago

good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

gene specific charts do not have a 'compare groups' option 4 months ago

enhancement good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Structural Variant Table (counts, not genes) doesn't show state properly 4 months ago

AI Summary: The Structural Variant (SV) table, specifically the 'counts, not genes' version, is not properly reflecting its state when used to filter data. When a filter is applied via this table, the corresponding filter checkbox in the UI does not visually update to show it is selected, leading to a discrepancy between the active filter and its visual representation. Reproducing this requires enabling a specific `localStorage` configuration.

Complexity: 3/5

bug study page good first issue

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics

Java

#cancer-genomics#precision-medicine#science#visualization

Fonts in validation UI of gene selector are needlessly large 4 months ago

good first issue text improvement

cBioPortal/cbioportal

1.0K

cBioPortal for Cancer Genomics