nf-core

nf-core/chipseq

ChIP-seq peak-calling, QC and differential analysis pipeline.

1 good first / help-wanted issue · Nextflow · last activity Jun 30, 2026

242 stars 180 forks 242 watchers Nextflow MIT License
chip chip-seq chromatin-immunoprecipitation macs2 nextflow nf-core peak-calling pipeline workflow
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1 Open Issue Need Help Last updated: Jun 30, 2026

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Implementation of Nucleosome and Protein Occupancy analysis 3 months ago
feature-request help wanted enhancement
nf-core/chipseq
242

ChIP-seq peak-calling, QC and differential analysis pipeline.

Nextflow
#chip#chip-seq#chromatin-immunoprecipitation#macs2#nextflow#nf-core#peak-calling#pipeline#workflow