A pipeline that can be used to recover corrupted FASTQ.gz files, drop or fix uncompliant reads, remove unpaired reads, and settles reads that became disordered

corruption data-cleaning data-recovery fastq fastq-corrupted fastq-format nextflow nf-core pipeline reads-interleaving recovery-tool unpaired-reads well-formed workflow
1 Open Issue Need Help Last updated: Jul 27, 2026

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bug good first issue priority: low area: infra

A pipeline that can be used to recover corrupted FASTQ.gz files, drop or fix uncompliant reads, remove unpaired reads, and settles reads that became disordered

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#corruption#data-cleaning#data-recovery#fastq#fastq-corrupted#fastq-format#nextflow#nf-core#pipeline#reads-interleaving#recovery-tool#unpaired-reads#well-formed#workflow