nf-core

nf-core/smrnaseq

A small-RNA sequencing analysis pipeline

2 good first / help-wanted issues · Nextflow · last activity Aug 5, 2026

101 stars 136 forks 101 watchers Nextflow MIT License
nextflow nf-core pipeline small-rna smrna-seq workflow
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2 Open Issues Need Help Last updated: Aug 5, 2026

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Support for additional small RNA biotypes (piRNA, tRNA, rRNA, etc.) 3 months ago
enhancement help wanted question documentation
nf-core/smrnaseq
101

A small-RNA sequencing analysis pipeline

Nextflow
#nextflow#nf-core#pipeline#small-rna#smrna-seq#workflow
Remove Duplicates in mirtop.tsv removes more lines than expected 6 months ago
help wanted question
nf-core/smrnaseq
101

A small-RNA sequencing analysis pipeline

Nextflow
#nextflow#nf-core#pipeline#small-rna#smrna-seq#workflow